Andreas Sjödin

Contact

andreas.sjodin@foi.se

Works at

Affiliated as other position at Department of Clinical Microbiology

6F och 6M, Universitetssjukhuset by 6 o 24 Umeå universitet, 901 85 Umeå

Publications Publications

Association between Legionella species and humic substances during early summer in the northern Baltic Sea

Frontiers in Marine Science, Frontiers Media S.A. 2023, Vol. 9

Eriksson, Karolina Ida Anna; Ahlinder, Jon; Ramasamy, Kesava Priyan; et al.

Targeting the gut-lung axis by synbiotic feeding to infants in a randomized controlled trial

BMC Biology, BioMed Central (BMC) 2023, Vol. 21, (1)

Sjödin, Kotryna Simonyté; Sjödin, Andreas; Ruszczyński, Marek; et al.

Clinical and genomic characterisation of a fatal Puumala orthohantavirus case with low levels of neutralising antibodies

Infectious Diseases, Vol. 54, (10) : 766-772

Tuiskunen-Bäck, Anne; Rasmuson, Johan; Thunberg, Therese; et al.

A whole-genome sequenced control population in northern Sweden reveals subregional genetic differences

PLOS ONE, Public Library Science 2020, Vol. 15, (9)

Svensson, Daniel; Rentoft, Matilda; Dahlin, Anna M.; et al.

A geographically matched control population efficiently limits the number of candidate disease-causing variants in an unbiased whole-genome analysis

PLOS ONE, Public Library of Science 2019, Vol. 14, (3)

Rentoft, Matilda; Svensson, Daniel; Sjödin, Andreas; et al.

A New Species of the gamma-Proteobacterium Francisella, F. adeliensis Sp. Nov., Endocytobiont in an Antarctic Marine Ciliate and Potential Evolutionary Forerunner of Pathogenic Species

Microbial Ecology, Springer 2019, Vol. 77, (3) : 587-596

Vallesi, Adriana; Sjödin, Andreas; Petrelli, Dezemona; et al.

Reassessing the Role of Type II Toxin-Antitoxin Systems in Formation of Escherichia coli Type II Persister Cells

mBio, American Society for Microbiology 2018, Vol. 9, (3)

Goormaghtigh, Frederic; Fraikin, Nathan; Putrins, Marta; et al.

Bioconda: sustainable and comprehensive software distribution for the life sciences

Nature Methods, Nature Publishing Group 2018, Vol. 15, (7) : 475-476

Grüning, Björn; Dale, Ryan; Sjödin, Andreas; et al.

Microbial community response to growing season and plant nutrient optimisation in a boreal Norway spruce forest

Soil Biology and Biochemistry, Elsevier 2018, Vol. 125 : 197-209

Haas, Julia Christa; Street, Nathaniel R.; Sjödin, Andreas; et al.

Accounting for bacterial overlap between raw water communities and contaminating sources improves the accuracy of signature-based microbial source tracking

Frontiers in Microbiology, Frontiers Media S.A. 2018, Vol. 9

Hägglund, Moa; Bäckman, Stina; Macellaro, Anna; et al.

Scaffolding of a bacterial genome using MinION nanopore sequencing

Scientific Reports, Vol. 5

Karlsson, E.; Larkeryd, A.; Sjödin, Andreas; et al.

The Plant Genome Integrative Explorer Resource: PlantGenIE.org

New Phytologist, Vol. 208, (4) : 1149-1156

Sundell, David; Mannapperuma, Chanaka; Netotea, Sergiu; et al.

Complete Genome Sequence of Francisella guangzhouensis Strain 08HL01032(T), Isolated from Air-Conditioning Systems in China

Microbiology Resource Announcements, Washington: American Society for Microbiology 2015, Vol. 3, (2)

Svensson, Daniel; Öhrman, Caroline; Bäckman, Stina; et al.

CanSNPer: a hierarchical genotype classifier of clonal pathogens

Bioinformatics, Oxford University Press 2014, Vol. 30, (12) : 1762-1764

Lärkeryd, Adrian; Myrtennäs, Kerstin; Karlsson, Edvin; et al.

The phylogeographic pattern of Francisella tularensis in Sweden indicates a Scandinavian origin of Eurosiberian tularaemia

Environmental Microbiology, Vol. 15, (2) : 634-645

Karlsson, Edvin; Svensson, Kerstin; Lindgren, Petter; et al.

Genome sequence of Francisella Tularensis subspecies holarctica Strain FSC200, isolated from a child with Tularemia

Journal of Bacteriology, American Society for Microbiology 2012, Vol. 194, (24) : 6965-6966

Myrtennäs, Kerstin; Sjödin, Andreas; Byström, Mona; et al.

A unique program for cell death in xylem fibers of Populus stem

The Plant Journal, Vol. 58, (2) : 260-274

Courtois-Moreau, Charleen L; Pesquet, Edouard; Sjödin, Andreas; et al.

The control of autumn senescence in European aspen

Plant Physiology, Vol. 149, (4) : 1982-1991

Fracheboud, Yvan; Luquez, Virginia; Björkén, Lars; et al.

Orthogonal projections to latent structures as a strategy for microarray data normalization

BMC Bioinformatics, Vol. 8, (207)

Bylesjö, Max; Eriksson, Daniel; Sjödin, Andreas; et al.

Environmental and hormonal regulation of the activity–dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks

The Plant Journal, Vol. 50 : 557-73

Druart, Nathalie; Johansson, Annika; Baba, Kyoko; et al.

Growth-phase-dependent gene expression profiling of poplar (Populus alba x Populus tremula var. glandulosa) suspension cells

Physiologia Plantarum, John Wiley & Sons 2007, Vol. 131, (4) : 599-613

Lee, Hyoshin; Bae, Eun-Kyung; Park, So-Young; et al.

MASQOT-GUI: spot quality assessment for the two-channel microarray platform

Bioinformatics, Vol. 22, (20) : 2554-2555

Bylesjö, Max; Sjödin, Andreas; Eriksson, Daniel; et al.

Molecular targets of elevated [CO2] in leaves and stems of Populus deltoides: implications for future tree growth and carbon sequestration

Functional Plant Biology, Vol. 33 : 121-131

Druart, Nathalie; Rodriguez-Buey, Marisa; Barron-Gafford, Greg; et al.

Abundantly and rarely expressed Lhc protein genes exhibit distinct regulation patterns in plants.

Plant Physiology, Vol. 140, (3) : 793-804

Klimmek, Frank; Sjödin, Andreas; Noutsos, Christos; et al.

The genetics and genomics of the drought response in Populus.

The Plant Journal, Vol. 48, (3) : 321-41

Street, Nathaniel Robert; Skogström, Oskar; Sjödin, Andreas; et al.

MASQOT: a method for cDNA microarray spot quality control.

BMC Bioinformatics, Vol. 6 : 250-

Bylesjö, Max; Eriksson, Daniel; Sjödin, Andreas; et al.

The transcriptome of Populus in elevated CO2.

New Phytologist, Vol. 167, (1) : 143-54

Taylor, Gail; Street, Nathaniel R; Tricker, Penny J; et al.

Oligotyping reveals divergent responses of predation resistant bacteria to aquatic productivity and plankton composition

Ahlinder, Jon; Mathisen, Peter; Sjödin, Andreas; et al.

Reproducibility and biological information of tree-associated metacommunities using RNA Sequencing and DNA amplicon profiling

Sundström, Görel; Schneider, Andreas N.; Richau, Kerstin; et al.

View publications in DiVA