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Department of Medical Biochemistry and Biophysics
Research
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Publications
Publications
2024
The separate axes of TECPR1 and ATG16L1 in CASM
Autophagy
, Taylor & Francis Group 2024, Vol. 20, (1) : 214-215
Kaur, Namrita; Carlsson, Sven R.; Lystad, Alf Håkon
2024
Functional annotation of a divergent genome using sequence and structure-based similarity
BMC Genomics
, BioMed Central (BMC) 2024, Vol. 25, (1)
Svedberg, Dennis; Winiger, Rahel R.; Berg, Alexandra; et al.
2024
Switchable tetraplex elements in the heterogeneous nuclear ribonucleoprotein K promoter: micro-environment dictated structural transitions of G/C rich elements
Journal of Biomolecular Structure and Dynamics
Bose, Debopriya; Banerjee, Nilanjan; Roy, Ananya; et al.
2024
Quantification of all 12 canonical ribonucleotides by real-time fluorogenic in vitro transcription
Nucleic Acids Research
, Oxford University Press 2024, Vol. 52, (1)
Purhonen, Janne; Hofer, Anders; Kallijärvi, Jukka
2024
The surprising nonlinear effects of S100A9 proteins in the retina
ACS Chemical Neuroscience
, American Chemical Society (ACS) 2024, Vol. 15, (4) : 735-744
Naaman, Efrat; Qarawani, Amanda; Ben-Zvi Elimelech, Rony; et al.
2024
Staphylococcus aureus mutants resistant to the feed-additive monensin show increased virulence and altered purine metabolism
mBio
, American Society for Microbiology 2024, Vol. 15, (2)
Warsi, Omar M.; Upterworth, Lina M.; Breidenstein, Annika; et al.
2024
Ultrastructural insights into the microsporidian infection apparatus reveal the kinetics and morphological transitions of polar tube and cargo during host cell invasion
PLoS biology
, Public Library of Science (PLoS) 2024, Vol. 22, (2)
Sharma, Himanshu; Jespersen, Nathan; Ehrenbolger, Kai; et al.
2024
Pseudomonas syringae infectivity correlates to altered transcript and metabolite levels of Arabidopsis mediator mutants
Scientific Reports
, Springer Nature 2024, Vol. 14, (1)
Blomberg, Jeanette; Tasselius, Viktor; Vergara, Alexander; et al.
2024
Small molecules dominate organic phosphorus in NaOH-EDTA extracts of soils as determined by 31P NMR
Science of the Total Environment
, Elsevier 2024, Vol. 931
Haddad, Lenny; Vincent, Andrea G.; Giesler, Reiner; et al.
2024
PrgE: an OB-fold protein from plasmid pCF10 with striking differences to prototypical bacterial SSBs
Life Science Alliance
, Life Science Alliance 2024, Vol. 7, (8)
Breidenstein, Annika; Lamy, Anaïs; Bader P.J., Cyrielle; et al.
2024
A chemical inhibitor of IST1-CHMP1B interaction impairs endosomal recycling and induces noncanonical LC3 lipidation
Proceedings of the National Academy of Sciences of the United States of America
, Proceedings of the National Academy of Sciences 2024, Vol. 121, (17)
Knyazeva, Anastasia; Li, Shuang; Corkery, Dale P.; et al.
2024
Physical interactions between specifically regulated subpopulations of the MCM and RNR complexes prevent genetic instability
PLOS Genetics
, Public Library of Science (PLoS) 2024, Vol. 20, (5)
Yáñez-Vilches, Aurora; Romero, Antonia M.; Barrientos-Moreno, Marta; et al.
2024
Antagonistic interactions safeguard mitotic propagation of genetic and epigenetic information in zebrafish
Communications Biology
, Nature Publishing Group 2024, Vol. 7, (1)
Lawir, Divine-Fondzenyuy; Soza-Ried, Cristian; Iwanami, Norimasa; et al.
2024
Molecular insights into the fine-tuning of pH-dependent ArsR-mediated regulation of the SabA adhesin in Helicobacter pylori
Nucleic Acids Research
, Oxford University Press 2024, Vol. 52, (10) : 5572-5595
Åberg, Anna; Gideonsson, Pär; Bhat, Abhayprasad; et al.
2024
Campylobacter jejuni surface-bound protease HtrA, but not the secreted protease nor protease in shed membrane vesicles, disrupts epithelial cell-to-cell junctions
Cells
, MDPI 2024, Vol. 13, (3)
Sharafutdinov, Irshad; Tegtmeyer, Nicole; Rohde, Manfred; et al.
2024
Antimicrobial activity of two different types of silver nanoparticles against wide range of pathogenic bacteria
Nanomaterials
, MDPI 2024, Vol. 14, (2)
Holubnycha, Viktoriia; Husak, Yevheniia; Korniienko, Viktoriia; et al.
2024
Exploring the dispersion and electrostatic components in arene-arene interactions between ligands and G4 DNA to develop G4-ligands
Journal of Medicinal Chemistry
, American Chemical Society (ACS) 2024, Vol. 67, (3) : 2202-2219
Andréasson, Måns; Donzel, Maxime; Abrahamsson, Alva; et al.
2024
Nuclear Hsp104 safeguards the dormant translation machinery during quiescence
Nature Communications
, Springer Nature 2024, Vol. 15, (1)
Kohler, Verena; Kohler, Andreas; Berglund, Lisa Larsson; et al.
2024
Spiders use structural conversion of globular amyloidogenic domains to make strong silk fibers
Advanced Functional Materials
, Wiley-VCH Verlagsgesellschaft 2024, Vol. 34, (23)
Qi, Xingmei; Wang, Han; Wang, Kezhen; et al.
2024
Growth-regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes
Nucleic Acids Research
, Oxford University Press 2024, Vol. 52, (11) : 6220-6233
Abdel-Fattah, Wael R.; Carlsson, Mattias; Hu, Guo-Zhen; et al.
2024
A distinctive family of L,D-transpeptidases catalyzing L-Ala-mDAP crosslinks in Alpha- and Betaproteobacteria
Nature Communications
, Springer Nature 2024, Vol. 15, (1)
Espaillat, Akbar; Alvarez, Laura; Torrens, Gabriel; et al.
2023
Quality research needs good working conditions
Nature Human Behaviour
, Nature Publishing Group 2023, Vol. 7 : 164-167
Rahal, Rima-Maria; Fiedler, Susann; Adetula, Adeyemi; et al.
2023
Targeting the nucleotide metabolism of Trypanosoma brucei and other trypanosomatids
FEMS Microbiology Reviews
, Oxford University Press 2023, Vol. 47, (3)
Hofer, Anders
2023
NUDT6 and NUDT9, two mitochondrial members of the NUDIX family, have distinct hydrolysis activities
Mitochondrion (Amsterdam. Print)
, Elsevier 2023, Vol. 71 : 93-103
Debar, Louis; Ishak, Layal; Moretton, Amandine; et al.
2023
The organization of double-stranded RNA in the chikungunya virus replication organelle
PLoS Neglected Tropical Diseases
, Public Library of Science (PLoS) 2023, Vol. 17, (7)
Laurent, Timothée; Carlson, Lars-Anders
2023
Impairment of the non-catalytic subunit Dpb2 of DNA Pol ɛ results in increased involvement of Pol δ on the leading strand
DNA Repair
, Elsevier 2023, Vol. 129
Dmowski, Michal; Makiela-Dzbenska, Karolina; Sharma, Sushma; et al.
2023
Unravelling the Therapeutic Potential of Antibiotics in Hypoxia in a Breast Cancer MCF-7 Cell Line Model
International Journal of Molecular Sciences
, MDPI 2023, Vol. 24, (14)
Akhunzianov, Almaz A.; Nesterova, Alfiya I.; Wanrooij, Sjoerd; et al.
2023
A 3D view of how enteroviruses hijack autophagy
Autophagy
, Taylor & Francis Group 2023, Vol. 19, (7) : 2156-2158
Dahmane, Selma; Shankar, Kasturika; Carlson, Lars-Anders
2023
Residue-specific binding of Ni(II) ions influences the structure and aggregation of amyloid beta (Aβ) peptides
Scientific Reports
, Nature Publishing Group 2023, Vol. 13, (1)
Berntsson, Elina; Vosough, Faraz; Svantesson, Teodor; et al.
2023
Common mechanisms underlying α-synuclein-induced mitochondrial dysfunction in Parkinson's disease
Journal of Molecular Biology
Sohrabi, Tahereh; Mirzaei-Behbahani, Behnaz; Zadali, Ramin; et al.
2023
Plasma IAPP-autoantibody levels in Alzheimer’s disease patients are affected by APOE4 status
International Journal of Molecular Sciences
, MDPI 2023, Vol. 24, (4)
Pocevičiūtė, Dovilė; Roth, Bodil; Schultz, Nina; et al.
2023
Proinflammatory S100A9 stimulates TLR4/NF-κB signaling pathways causing enhanced phagocytic capacity of microglial cells
Immunology Letters
, Elsevier 2023, Vol. 255 : 54-61
Zhang, Xiaoyin; Sun, Dan; Zhou, Xin; et al.
2023
A model of photosynthetic CO
2
assimilation in C
3
leaves accounting for respiration and energy recycling by the plastidial oxidative pentose phosphate pathway
New Phytologist
, John Wiley & Sons 2023, Vol. 239, (2) : 518-532
Wieloch, Thomas; Augusti, Angela; Schleucher, Jürgen
2023
Type I interferon shapes brain distribution and tropism of tick-borne flavivirus
Nature Communications
, Springer Nature 2023, Vol. 14, (1)
Chotiwan, Nunya; Rosendal, Ebba; Willekens, Stefanie M. A.; et al.
2023
Mitochondrial membrane potential acts as a retrograde signal to regulate cell cycle progression
Life Science Alliance
, Life Science Alliance, LLC 2023, Vol. 6, (12)
Gorospe, Choco Michael; Carvalho, Gustavo; Herrera Curbelo, Alicia; et al.
2023
The stabilization of S100A9 structure by calcium inhibits the formation of amyloid fibrils
International Journal of Molecular Sciences
, MDPI 2023, Vol. 24, (17)
Sanders, Ella; Csondor, Rebecca; Šulskis, Darius; et al.
2023
Heavy metals effect on the rat uterus and effectiveness of vitamin E treatment
Jordan Journal of Biological Sciences
, Hashemite University 2023, Vol. 16, (3) : 455-465
Sikora, K.; Lyndin, M.; Sikora, V.; et al.
2023
TECPR1 is activated by damage-induced sphingomyelin exposure to mediate noncanonical autophagy
EMBO Journal
, EMBO Press 2023, Vol. 42, (17)
Kaur, Namrita; de la Ballina, Laura Rodriguez; Haukaas, Håvard Styrkestad; et al.
2023
Metastatic ovarian cancer: bibliographic analysis
Eastern Ukrainian Medical Journal
, Sumy State University 2023, Vol. 11, (4) : 352-359
Piddubnyi, Artem; Tkachenko, Iryna; Shubin, Pavlo; et al.
2023
NME6: ribonucleotide salvage sustains mitochondrial transcription
EMBO Journal
, John Wiley & Sons 2023, Vol. 42, (18)
Wanrooij, Paulina H.; Chabes, Andrei
2023
Spider silk protein forms amyloid-like nanofibrils through a non-nucleation-dependent polymerization mechanism
Small
, John Wiley & Sons 2023, Vol. 18, (46)
Qi, Xingmei; Wang, Yu; Yu, Hairui; et al.
2023
A comprehensive study of dura mater biomineralization: morphological, crystallographic, and immunohistochemical aspects
Reports of Morphology
, Vinnytsia National Pyrogov Memorial Medical University 2023, Vol. 29, (4) : 50-57
Denysenko, A.P.; Piddubnyi, Artem; Tkachenko, Iryna; et al.
2023
Effect of proinflammatory S100A9 protein on migration and proliferation of microglial cells
Journal of Molecular Neuroscience
, Springer Nature 2023, Vol. 73, (11-12) : 983-995
Bai, Qiao; Sun, Dan; Zeng, Yang; et al.
2023
A sensor complements the steric gate when DNA polymerase ϵ discriminates ribonucleotides
Nucleic Acids Research
, Oxford University Press 2023, Vol. 51, (20) : 11225-11238
Parkash, Vimal; Kulkarni, Yashraj; Bylund, Göran O.; et al.
2023
Ferric quinate (QPLEX) inhibits the interaction of major outer membrane protein (MOMP) with the Lewis b (Leb) antigen and limits Campylobacter colonization in broilers
Frontiers in Microbiology
, Frontiers Media S.A. 2023, Vol. 14
Okoye, Jennifer C.; Holland, Alexandria; Pitoulias, Matthaios; et al.
2023
Synthesis of a B-antigen hexasaccharide, a B-lewis b heptasaccharide and glycoconjugates thereof to investigate binding properties of helicobacter pylori
Chemistry - A European Journal
, Wiley-VCH Verlagsgesellschaft 2023, Vol. 29, (16)
Reihill, Mark; Fournière, Viviane; Cheallaigh, Aisling Ní; et al.
2023
D-amino acids signal a stress-dependent run-away response in Vibrio cholerae
Nature Microbiology
, Springer Nature 2023, Vol. 8, (8) : 1549-1560
Irazoki, Oihane; ter Beek, Josy; Alvarez, Laura; et al.
2023
Structural foundation for the role of enterococcal PrgB in conjugation, biofilm formation, and virulence
eLIFE
, eLife Sciences Publications Ltd 2023, Vol. 12
Sun, Wei-Sheng; Lassinantti, Lena; Järvå, Michael A.; et al.
2023
Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing
Life Science Alliance
, Life Science Alliance, LLC 2023, Vol. 6, (4)
Breidenstein, Annika; ter Beek, Josy; Berntsson, Ronnie
2023
A new G-quadruplex-specific photosensitizer inducing genome instability in cancer cells by triggering oxidative DNA damage and impeding replication fork progression
Nucleic Acids Research
, Oxford University Press 2023, Vol. 51, (12) : 6264-6285
Deiana, Marco; Andrés Castán, José María; Josse, Pierre; et al.
Latest update:
2019-12-05