Publications

The separate axes of TECPR1 and ATG16L1 in CASM

Autophagy, Taylor & Francis Group 2024, Vol. 20, (1) : 214-215

Kaur, Namrita; Carlsson, Sven R.; Lystad, Alf Håkon

Switchable tetraplex elements in the heterogeneous nuclear ribonucleoprotein K promoter: micro-environment dictated structural transitions of G/C rich elements

Journal of Biomolecular Structure and Dynamics

Bose, Debopriya; Banerjee, Nilanjan; Roy, Ananya; et al.

Quantification of all 12 canonical ribonucleotides by real-time fluorogenic in vitro transcription

Nucleic Acids Research, Oxford University Press 2024, Vol. 52, (1)

Purhonen, Janne; Hofer, Anders; Kallijärvi, Jukka

The surprising nonlinear effects of S100A9 proteins in the retina

ACS Chemical Neuroscience, American Chemical Society (ACS) 2024, Vol. 15, (4) : 735-744

Naaman, Efrat; Qarawani, Amanda; Ben-Zvi Elimelech, Rony; et al.

Staphylococcus aureus mutants resistant to the feed-additive monensin show increased virulence and altered purine metabolism

mBio, American Society for Microbiology 2024, Vol. 15, (2)

Warsi, Omar M.; Upterworth, Lina M.; Breidenstein, Annika; et al.

Ultrastructural insights into the microsporidian infection apparatus reveal the kinetics and morphological transitions of polar tube and cargo during host cell invasion

PLoS biology, Public Library of Science (PLoS) 2024, Vol. 22, (2)

Sharma, Himanshu; Jespersen, Nathan; Ehrenbolger, Kai; et al.

Pseudomonas syringae infectivity correlates to altered transcript and metabolite levels of Arabidopsis mediator mutants

Scientific Reports, Springer Nature 2024, Vol. 14, (1)

Blomberg, Jeanette; Tasselius, Viktor; Vergara, Alexander; et al.

Small molecules dominate organic phosphorus in NaOH-EDTA extracts of soils as determined by 31P NMR

Science of the Total Environment, Elsevier 2024, Vol. 931

Haddad, Lenny; Vincent, Andrea G.; Giesler, Reiner; et al.

A chemical inhibitor of IST1-CHMP1B interaction impairs endosomal recycling and induces noncanonical LC3 lipidation

Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences 2024, Vol. 121, (17)

Knyazeva, Anastasia; Li, Shuang; Corkery, Dale P.; et al.

Physical interactions between specifically regulated subpopulations of the MCM and RNR complexes prevent genetic instability

PLOS Genetics, Public Library of Science (PLoS) 2024, Vol. 20, (5)

Yáñez-Vilches, Aurora; Romero, Antonia M.; Barrientos-Moreno, Marta; et al.

Antagonistic interactions safeguard mitotic propagation of genetic and epigenetic information in zebrafish

Communications Biology, Nature Publishing Group 2024, Vol. 7, (1)

Lawir, Divine-Fondzenyuy; Soza-Ried, Cristian; Iwanami, Norimasa; et al.

Molecular insights into the fine-tuning of pH-dependent ArsR-mediated regulation of the SabA adhesin in Helicobacter pylori

Nucleic Acids Research, Oxford University Press 2024, Vol. 52, (10) : 5572-5595

Åberg, Anna; Gideonsson, Pär; Bhat, Abhayprasad; et al.

Campylobacter jejuni surface-bound protease HtrA, but not the secreted protease nor protease in shed membrane vesicles, disrupts epithelial cell-to-cell junctions

Cells, MDPI 2024, Vol. 13, (3)

Sharafutdinov, Irshad; Tegtmeyer, Nicole; Rohde, Manfred; et al.

Antimicrobial activity of two different types of silver nanoparticles against wide range of pathogenic bacteria

Nanomaterials, MDPI 2024, Vol. 14, (2)

Holubnycha, Viktoriia; Husak, Yevheniia; Korniienko, Viktoriia; et al.

Exploring the dispersion and electrostatic components in arene-arene interactions between ligands and G4 DNA to develop G4-ligands

Journal of Medicinal Chemistry, American Chemical Society (ACS) 2024, Vol. 67, (3) : 2202-2219

Andréasson, Måns; Donzel, Maxime; Abrahamsson, Alva; et al.

Nuclear Hsp104 safeguards the dormant translation machinery during quiescence

Nature Communications, Springer Nature 2024, Vol. 15, (1)

Kohler, Verena; Kohler, Andreas; Berglund, Lisa Larsson; et al.

Spiders use structural conversion of globular amyloidogenic domains to make strong silk fibers

Advanced Functional Materials, Wiley-VCH Verlagsgesellschaft 2024, Vol. 34, (23)

Qi, Xingmei; Wang, Han; Wang, Kezhen; et al.

Growth-regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes

Nucleic Acids Research, Oxford University Press 2024, Vol. 52, (11) : 6220-6233

Abdel-Fattah, Wael R.; Carlsson, Mattias; Hu, Guo-Zhen; et al.

A distinctive family of L,D-transpeptidases catalyzing L-Ala-mDAP crosslinks in Alpha- and Betaproteobacteria

Nature Communications, Springer Nature 2024, Vol. 15, (1)

Espaillat, Akbar; Alvarez, Laura; Torrens, Gabriel; et al.

Pro-inflammatory protein S100A9 targeted by a natural molecule to prevent neurodegeneration onset

International Journal of Biological Macromolecules, Elsevier 2024, Vol. 276, (Part 2)

Leri, Manuela; Sun, Dan; Svedružic, Željko M.; et al.

G4-ligand-conjugated oligonucleotides mediate selective binding and stabilization of individual G4 DNA structures

Journal of the American Chemical Society, American Chemical Society (ACS) 2024, Vol. 146, (10) : 6926-6935

Berner, Andreas; Das, Rabindra Nath; Bhuma, Naresh; et al.

Breaking barriers: pCF10 type 4 secretion system relies on a self-regulating muramidase to modulate the cell wall

mBio, American Society for Microbiology 2024, Vol. 15, (8)

Sun, Wei-Sheng; Torrens, Gabriel; ter Beek, Josy; et al.

ApoE isoforms inhibit amyloid aggregation of proinflammatory protein S100a9

International Journal of Molecular Sciences, MDPI 2024, Vol. 25, (4)

Ghosh, Shamasree; Tamilselvi, Shanmugam; Williams, Chloe; et al.

In vitro reconstitution reveals membrane clustering and RNA recruitment by the enteroviral AAA+ ATPase 2C

PLoS Pathogens, Public Library of Science (PLoS) 2024, Vol. 20, (8)

Shankar, Kasturika; Sorin, Marie; Sharma, Himanshu; et al.

How tumors hijack macrophages for immune evasion

Nature Cancer, Springer Nature 2024, Vol. 5, (8) : 1134-1135

Hofer, Anders

CDK8 of the mediator kinase module connects leaf development to the establishment of correct stomata patterning by regulating the levels of the transcription factor SPEECHLESS (SPCH)

Plant, Cell and Environment

Hermida-Carrera, Carmen; Vergara, Alexander; Cervela-Cardona, Luis Manuel; et al.

A charged tail on anti-α-synuclein antibodies does not enhance their affinity to α-synuclein fibrils

PLOS ONE, Public Library of Science (PLoS) 2024, Vol. 19, (8)

Petersen, Inga; Godec, Ana; Ranjbarian, Farahnaz; et al.

Structural basis for lipid transfer by the ATG2A–ATG9A complex

Nature Structural & Molecular Biology

Wang, Yang; Dahmane, Selma; Ti, Rujuan; et al.

Developmental signals control chromosome segregation fidelity during pluripotency and neurogenesis by modulating replicative stress

Nature Communications, Springer Nature 2024, Vol. 15, (1)

de Jaime-Soguero, Anchel; Hattemer, Janina; Bufe, Anja; et al.

Functional annotation of a divergent genome using sequence and structure-based similarity

BMC Genomics, BioMed Central (BMC) 2024, Vol. 25, (1)

Svedberg, Dennis; Winiger, Rahel R.; Berg, Alexandra; et al.

Nematocida displodere mechanosensitive ion channel of small conductance 2 assembles into a unique 6-channel super-structure in vitro

PLOS ONE, Public Library of Science (PLoS) 2024, Vol. 19, (7)

Berg, Alexandra; Berntsson, Ronnie P.-A.; Barandun, Jonas

PrgE: an OB-fold protein from plasmid pCF10 with striking differences to prototypical bacterial SSBs

Life Science Alliance, Life Science Alliance 2024, Vol. 7, (8)

Breidenstein, Annika; Lamy, Anaïs; Bader P.J., Cyrielle; et al.

Conjugative transfer of the IncN plasmid pKM101 is mediated by dynamic interactions between the TraK accessory factor and TraI relaxase

FEBS Letters

Li, Yang Grace; Breidenstein, Annika; Berntsson, Ronnie P.-A.; et al.

Harnessing light for G-quadruplex modulation: dual isomeric effects of an ortho-fluoroazobenzene derivative

The Journal of Physical Chemistry Letters, American Chemical Society (ACS) 2024, Vol. 15, (38) : 9757-9765

Dudek, Marta; López-Pacios, Lucía; Sabouri, Nasim; et al.

Heavy-atom-free π-twisted photosensitizers for fluorescence bioimaging and photodynamic therapy

Journal of materials chemistry. B, Royal Society of Chemistry 2024, Vol. 12, (33) : 8107-8121

Sánchez, Darío Puchán; Morice, Korentin; Mutovska, Monika G.; et al.

Clamping Pol ε to the leading strand

Nature Structural & Molecular Biology

Singh, Noopur; Johansson, Erik

Preferential binding of ADP-bound mitochondrial HSP70 to the nucleotide exchange factor GRPEL1 over GRPEL2

Protein Science, John Wiley & Sons 2024, Vol. 33, (11)

Manjunath, Pooja; Stojkovic, Gorazd; Euro, Liliya; et al.

Altered dNTP pools accelerate tumor formation in mice

Nucleic Acids Research, Oxford University Press 2024, Vol. 52, (20) : 12475-12486

Tran, Phong; Mishra, Pradeep; Williams, Leonard G.; et al.

Quality research needs good working conditions

Nature Human Behaviour, Nature Publishing Group 2023, Vol. 7 : 164-167

Rahal, Rima-Maria; Fiedler, Susann; Adetula, Adeyemi; et al.

Targeting the nucleotide metabolism of Trypanosoma brucei and other trypanosomatids

FEMS Microbiology Reviews, Oxford University Press 2023, Vol. 47, (3)

Hofer, Anders

NUDT6 and NUDT9, two mitochondrial members of the NUDIX family, have distinct hydrolysis activities

Mitochondrion (Amsterdam. Print), Elsevier 2023, Vol. 71 : 93-103

Debar, Louis; Ishak, Layal; Moretton, Amandine; et al.

The organization of double-stranded RNA in the chikungunya virus replication organelle

PLoS Neglected Tropical Diseases, Public Library of Science (PLoS) 2023, Vol. 17, (7)

Laurent, Timothée; Carlson, Lars-Anders

Impairment of the non-catalytic subunit Dpb2 of DNA Pol ɛ results in increased involvement of Pol δ on the leading strand

DNA Repair, Elsevier 2023, Vol. 129

Dmowski, Michal; Makiela-Dzbenska, Karolina; Sharma, Sushma; et al.

Unravelling the Therapeutic Potential of Antibiotics in Hypoxia in a Breast Cancer MCF-7 Cell Line Model

International Journal of Molecular Sciences, MDPI 2023, Vol. 24, (14)

Akhunzianov, Almaz A.; Nesterova, Alfiya I.; Wanrooij, Sjoerd; et al.

A 3D view of how enteroviruses hijack autophagy

Autophagy, Taylor & Francis Group 2023, Vol. 19, (7) : 2156-2158

Dahmane, Selma; Shankar, Kasturika; Carlson, Lars-Anders

Residue-specific binding of Ni(II) ions influences the structure and aggregation of amyloid beta (Aβ) peptides

Scientific Reports, Nature Publishing Group 2023, Vol. 13, (1)

Berntsson, Elina; Vosough, Faraz; Svantesson, Teodor; et al.

Plasma IAPP-autoantibody levels in Alzheimer’s disease patients are affected by APOE4 status

International Journal of Molecular Sciences, MDPI 2023, Vol. 24, (4)

Pocevičiūtė, Dovilė; Roth, Bodil; Schultz, Nina; et al.

Proinflammatory S100A9 stimulates TLR4/NF-κB signaling pathways causing enhanced phagocytic capacity of microglial cells

Immunology Letters, Elsevier 2023, Vol. 255 : 54-61

Zhang, Xiaoyin; Sun, Dan; Zhou, Xin; et al.

A model of photosynthetic CO₂ assimilation in C₃ leaves accounting for respiration and energy recycling by the plastidial oxidative pentose phosphate pathway

New Phytologist, John Wiley & Sons 2023, Vol. 239, (2) : 518-532

Wieloch, Thomas; Augusti, Angela; Schleucher, Jürgen

Mitochondrial membrane potential acts as a retrograde signal to regulate cell cycle progression

Life Science Alliance, Life Science Alliance, LLC 2023, Vol. 6, (12)

Gorospe, Choco Michael; Carvalho, Gustavo; Herrera Curbelo, Alicia; et al.

Latest update: 2019-12-05